STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK44003.1Polar amino acid transport system substrate-binding protein. (535 aa)    
Predicted Functional Partners:
SDK43955.1
Polar amino acid transport system ATP-binding protein.
 0.996
SDK69557.1
Polar amino acid transport system ATP-binding protein.
 0.987
SDK79823.1
Polar amino acid transport system ATP-binding protein.
 0.987
SDL34387.1
Polar amino acid transport system ATP-binding protein.
 0.987
SDL56312.1
Amino acid ABC transporter ATP-binding protein, PAAT family (TC 3.A.1.3.-).
 0.987
SDK50041.1
Amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family.
 
0.958
SDK79549.1
Hypothetical protein.
   
 0.922
SDL65990.1
Hypothetical protein.
   
 0.922
SDK69596.1
Polar amino acid transport system substrate-binding protein.
 
0.920
SDK39839.1
PAS domain S-box-containing protein.
   
 0.917
Your Current Organism:
Sarcina sp. DSM 11001
NCBI taxonomy Id: 1798184
Other names: S. sp. DSM 11001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.