STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL05738.1Protein of unknown function. (234 aa)    
Predicted Functional Partners:
SDL05707.1
Helix-turn-helix.
       0.787
SDL72395.1
Protein of unknown function.
  
     0.759
SDK79003.1
Hypothetical protein.
  
     0.549
SDK30645.1
P-loop protein of unknown function.
  
     0.546
SDL89677.1
Protein of unknown function.
  
     0.494
SDL88277.1
Conserved hypothetical protein (putative transposase or invertase).
  
     0.455
SDL31401.1
Conserved hypothetical protein (putative transposase or invertase).
  
     0.436
SDK78567.1
Hypothetical protein.
  
     0.428
SDM02181.1
PD-(D/E)XK nuclease family transposase.
  
     0.428
SDL91869.1
LPXTG-motif cell wall anchor domain-containing protein.
  
     0.420
Your Current Organism:
Sarcina sp. DSM 11001
NCBI taxonomy Id: 1798184
Other names: S. sp. DSM 11001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.