STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL03645.1Citrate synthase; Belongs to the citrate synthase family. (454 aa)    
Predicted Functional Partners:
SDK65595.1
Aconitate hydratase.
 
 0.992
SDL26221.1
acetyl-CoA synthetase.
  
 0.963
ldh
L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.
  
 0.959
SDL15041.1
L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily.
  
 0.959
SDK55258.1
Isocitrate dehydrogenase (NADP); Belongs to the isocitrate and isopropylmalate dehydrogenases family.
  
 0.944
SDK46735.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 0.941
SDK25878.1
Lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.931
SDL10269.1
2-methylcitrate dehydratase PrpD.
  
 
 0.920
fumC
Fumarase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
   
 0.913
SDK72138.1
Glutamate dehydrogenase (NADP+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 0.906
Your Current Organism:
Sarcina sp. DSM 11001
NCBI taxonomy Id: 1798184
Other names: S. sp. DSM 11001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.