STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL10390.1Hypothetical protein. (300 aa)    
Predicted Functional Partners:
SDL10501.1
Fumarate hydratase subunit alpha.
 
     0.820
SDL10432.1
Citrate lyase beta subunit.
 
     0.769
SDL10269.1
2-methylcitrate dehydratase PrpD.
 
     0.762
SDL10469.1
Fumarate hydratase subunit beta.
 
     0.673
SDK39163.1
Predicted O-methyltransferase YrrM.
  
  
 0.630
SDL10375.1
AAA-like domain-containing protein.
       0.490
dapB
Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.
  
 
  0.468
SDL38344.1
Aspartate-semialdehyde dehydrogenase; Belongs to the aspartate-semialdehyde dehydrogenase family.
    
  0.456
SDL63888.1
Uncharacterized membrane protein YesL.
  
     0.449
SDL10339.1
Phosphonopyruvate decarboxylase.
 
     0.440
Your Current Organism:
Sarcina sp. DSM 11001
NCBI taxonomy Id: 1798184
Other names: S. sp. DSM 11001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.