STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL15236.1Sensor histidine kinase inhibitor, KipI family. (241 aa)    
Predicted Functional Partners:
pxpA
UPF0271 protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
 
 0.999
SDL15198.1
Biotin-dependent carboxylase uncharacterized domain-containing protein.
 0.999
SDL15158.1
Uncharacterized protein YcsI, UPF0317 family; Belongs to the D-glutamate cyclase family.
 
    0.961
SDL26327.1
acetyl-CoA carboxylase, biotin carboxylase subunit.
 
 
  0.898
SDL25824.1
Glutamate synthase (ferredoxin).
   
 
  0.821
SDL15280.1
NRAMP (natural resistance-associated macrophage protein) metal ion transporters.
 
    0.791
SDL26404.1
acetyl-CoA carboxylase biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
  
 
  0.636
SDK25878.1
Lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 
 0.601
SDL05277.1
Biotin carboxyl carrier protein.
  
 
  0.563
SDL25896.1
Glutamine synthetase.
     
 0.491
Your Current Organism:
Sarcina sp. DSM 11001
NCBI taxonomy Id: 1798184
Other names: S. sp. DSM 11001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.