STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL13191.1Anaphase-promoting complex, cyclosome, subunit 3. (351 aa)    
Predicted Functional Partners:
SDK24674.1
Hypothetical protein.
    
 0.920
SDK27770.1
Protein tyrosine/serine phosphatase.
   
   0.761
SDK36159.1
Protein-tyrosine phosphatase.
   
   0.761
SDK79644.1
2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'-or 3'-nucleotidase, 5'-nucleotidase family; Belongs to the 5'-nucleotidase family.
   
   0.761
SDL71281.1
Tyrosine phosphatase family protein.
   
   0.761
SDK29911.1
MacB-like core domain-containing protein.
  
 0.720
SDK35461.1
Von Willebrand factor type A domain-containing protein.
   
 0.694
SDL16769.1
Serine protease, subtilisin family; Belongs to the peptidase S8 family.
   
 0.694
SDK91628.1
ABC-type multidrug transport system, ATPase component.
  
 0.692
SDL85949.1
ABC-type multidrug transport system, ATPase component.
  
 0.692
Your Current Organism:
Sarcina sp. DSM 11001
NCBI taxonomy Id: 1798184
Other names: S. sp. DSM 11001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.