STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL54924.1DNA-binding transcriptional regulator, MarR family. (162 aa)    
Predicted Functional Partners:
SDK83608.1
PTS system, sucrose-specific IIC component.
   
 
 0.858
SDL54968.1
RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
       0.537
SDM04608.1
Nitroreductase.
  
 
  0.491
SDK79549.1
Hypothetical protein.
  
  
 0.461
SDL55010.1
Hydrophobic/amphiphilic exporter-1, HAE1 family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
     
 0.444
SDL54876.1
Hypothetical protein.
       0.438
SDL02731.1
Pseudouridine-5'-phosphate glycosidase (pseudoU degradation).
     
 0.420
SDK45527.1
Nitroreductase.
   
 
  0.417
SDK63432.1
Putative TM nitroreductase.
   
 
  0.417
SDK69506.1
Hypothetical protein.
   
 
  0.417
Your Current Organism:
Sarcina sp. DSM 11001
NCBI taxonomy Id: 1798184
Other names: S. sp. DSM 11001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.