STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL80182.1Hypothetical protein. (212 aa)    
Predicted Functional Partners:
SDL80144.1
Hypothetical protein.
       0.788
SDL80060.1
Hypothetical protein.
       0.748
SDL80101.1
Hypothetical protein.
       0.748
SDL80220.1
Hypothetical protein.
       0.745
SDL80020.1
Signal peptidase I.
  
    0.608
SDL08111.1
Capsular exopolysaccharide family.
   
    0.456
SDL80262.1
Sortase A.
       0.447
Your Current Organism:
Sarcina sp. DSM 11001
NCBI taxonomy Id: 1798184
Other names: S. sp. DSM 11001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.