STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL82320.1Phage Terminase. (265 aa)    
Predicted Functional Partners:
SDL82355.1
Phage Terminase.
     0.994
SDL78203.1
Hypothetical protein.
  
     0.773
SDK86332.1
Site-specific DNA recombinase.
  
     0.747
SDK86288.1
Recombinase zinc beta ribbon domain-containing protein.
  
     0.702
SDL82395.1
Hypothetical protein.
       0.544
SDL82284.1
Hypothetical protein.
       0.533
SDL68662.1
Anti-repressor protein.
 
     0.442
Your Current Organism:
Sarcina sp. DSM 11001
NCBI taxonomy Id: 1798184
Other names: S. sp. DSM 11001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.