STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM04421.1Flavodoxin. (173 aa)    
Predicted Functional Partners:
SDM04447.1
Aldo/keto reductase.
      0.645
SDM04486.1
Protein of unknown function.
      0.605
SDM04391.1
Regulatory helix-turn-helix protein, lysR family.
       0.531
SDM04515.1
Predicted oxidoreductase.
       0.487
SDK46735.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
     
 0.459
SDM04543.1
Flavodoxin.
 
    
0.451
SDM04578.1
Enoyl-(Acyl carrier protein) reductase.
 
    0.405
Your Current Organism:
Sarcina sp. DSM 11001
NCBI taxonomy Id: 1798184
Other names: S. sp. DSM 11001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.