STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM04608.1Nitroreductase. (177 aa)    
Predicted Functional Partners:
birA
Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
  
    0.735
SDK91628.1
ABC-type multidrug transport system, ATPase component.
  
  
 0.654
SDL85949.1
ABC-type multidrug transport system, ATPase component.
  
  
 0.654
SDM04578.1
Enoyl-(Acyl carrier protein) reductase.
  
   0.626
SDL33380.1
NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family.
 
 
  0.606
SDL04313.1
Riboflavin kinase / FMN adenylyltransferase; Belongs to the ribF family.
    
 0.604
SDM07041.1
2,4-dienoyl-CoA reductase.
  
 
 0.600
SDM04543.1
Flavodoxin.
  
    0.564
SDL57657.1
NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family.
 
 
  0.556
SDK66450.1
Rubredoxin.
  
 
 0.554
Your Current Organism:
Sarcina sp. DSM 11001
NCBI taxonomy Id: 1798184
Other names: S. sp. DSM 11001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.