STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM10026.1Hypothetical protein. (400 aa)    
Predicted Functional Partners:
SDL82937.1
Adenine-specific DNA methylase, N12 class.
 
     0.974
SDM03537.1
Adenine-specific DNA methylase, N12 class.
 
     0.974
SDL76704.1
Hypothetical protein.
     0.972
SDL94231.1
NlpC/P60 family protein.
 
     0.802
SDL86070.1
Hypothetical protein.
 
     0.761
SDL94147.1
AAA-like domain-containing protein.
 
     0.758
SDL94305.1
Protein of unknown function.
 
     0.753
SDL69341.1
Cna protein B-type domain-containing protein.
  
     0.743
SDL94041.1
Hypothetical protein.
 
     0.739
SDL68584.1
Type IV secretory system Conjugative DNA transfer.
 
     0.696
Your Current Organism:
Sarcina sp. DSM 11001
NCBI taxonomy Id: 1798184
Other names: S. sp. DSM 11001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.