STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFH59273.1Pseudouridine kinase. (309 aa)    
Predicted Functional Partners:
SFH74943.1
PTS system, fructose-specific IIC component.
  
 
 0.942
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
  
 
 0.814
guaB
IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
   
 
 0.759
SFH59259.1
Diguanylate cyclase (GGDEF) domain-containing protein.
       0.723
SFI08226.1
Sugar phosphate isomerase/epimerase.
  
 
 0.704
SFI21771.1
Sugar phosphate isomerase/epimerase.
  
 
 0.704
SFH59289.1
GTPase, G3E family.
 
     0.666
SFH71551.1
Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
     
 0.657
SFI10569.1
Protein-tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
  
 
 0.646
SFH72468.1
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Belongs to the HisA/HisF family.
  
    0.637
Your Current Organism:
Pseudobutyrivibrio sp. OR37
NCBI taxonomy Id: 1798186
Other names: P. sp. OR37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.