STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFI08343.1ATPase. (353 aa)    
Predicted Functional Partners:
SFH57935.1
P-loop protein of unknown function.
  
 
   0.769
metN
D-methionine transport system ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
    
   0.708
SFH79352.1
Ech hydrogenase subunit C.
    
   0.697
SFI08322.1
Cytidyltransferase-like domain-containing protein.
  
    0.656
SFI08226.1
Sugar phosphate isomerase/epimerase.
       0.651
SFI08250.1
Hypothetical protein.
       0.651
SFH71947.1
Zinc transport system substrate-binding protein.
  
 
 0.591
SFH90543.1
Zinc transport system substrate-binding protein.
  
 
 0.591
SFH71986.1
Zinc transport system permease protein.
  
 
 0.572
SFH90484.1
Zinc transport system permease protein.
  
 
 0.572
Your Current Organism:
Pseudobutyrivibrio sp. OR37
NCBI taxonomy Id: 1798186
Other names: P. sp. OR37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.