STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX08265.1Cytochrome c-550 PedF. (156 aa)    
Predicted Functional Partners:
SDY31093.1
Cytochrome c oxidase subunit 2.
  
 0.996
SDY00209.1
Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 0.982
SDY00173.1
Ubiquinol-cytochrome c reductase cytochrome b subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 0.978
SDX41064.1
Cytochrome c oxidase cbb3-type subunit 1; Belongs to the heme-copper respiratory oxidase family.
  
 0.967
SDX41027.1
Cytochrome c oxidase cbb3-type subunit 2.
  
 0.964
SDX50280.1
Formate dehydrogenase (quinone-dependent) iron-sulfur subunit.
  
 0.922
SDX08067.1
Alcohol dehydrogenase (cytochrome c).
 
 
 0.907
SDX08296.1
ABC-type amino acid transport substrate-binding protein.
 
  
  0.901
SDX07931.1
40-residue YVTN family beta-propeller repeat-containing protein.
 
  0.896
SDX26322.1
Nitrate reductase alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
   
 0.864
Your Current Organism:
Collimonas sp. OK242
NCBI taxonomy Id: 1798195
Other names: C. sp. OK242
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.