STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX91867.1Uncharacterized conserved protein, Alpha-E superfamily. (338 aa)    
Predicted Functional Partners:
SDX91843.1
Uncharacterized conserved protein, circularly permuted ATPgrasp superfamily.
  
 0.989
SDX91893.1
Transglutaminase-like enzyme, putative cysteine protease.
  
 0.965
SDX91915.1
Putative proteasome-type protease.
 
    0.905
SDX91700.1
Transglutaminase-like enzyme, putative cysteine protease.
  
 0.866
SDX91724.1
Uncharacterized conserved protein, circularly permuted ATPgrasp superfamily.
 
  
0.848
SDX91747.1
Uncharacterized conserved protein, DUF2126 family.
 
    0.790
SDX91817.1
Cupin domain-containing protein.
       0.425
Your Current Organism:
Collimonas sp. OK242
NCBI taxonomy Id: 1798195
Other names: C. sp. OK242
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.