STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY78296.1Cardiolipin synthase; Belongs to the phospholipase D family. Cardiolipin synthase subfamily. (444 aa)    
Predicted Functional Partners:
SDY22133.1
FeS assembly scaffold apoprotein IscU /Modular FeS cluster scaffolding protein NifU; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters.
   
   0.826
SDY55478.1
Acyl carrier protein.
   
 0.798
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
    
  0.747
SDY28290.1
Cystathionine beta-synthase.
    
  0.697
SDX20346.1
Cardiolipin synthase; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol; Belongs to the phospholipase D family. Cardiolipin synthase subfamily.
  
  
 
0.663
clsB
Putative cardiolipin synthase; Catalyzes the phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol.
  
  
 
0.661
groS
Chaperonin GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.
    
  0.660
SDX58232.1
Phosphatidylglycerophosphatase A; Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG).
     
 0.646
SDY78368.1
Site-specific recombinase.
       0.628
SDX92041.1
HAD-superfamily subfamily IB hydrolase, TIGR01490.
     
 0.608
Your Current Organism:
Collimonas sp. OK242
NCBI taxonomy Id: 1798195
Other names: C. sp. OK242
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