STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY93704.1Hypothetical protein. (95 aa)    
Predicted Functional Partners:
SDX28882.1
Non-ribosomal peptide synthetase terminal domain of unknown function; Belongs to the ATP-dependent AMP-binding enzyme family.
     
 0.497
SDY93727.1
Hypothetical protein.
       0.490
dapB
Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.
    
  0.454
Your Current Organism:
Collimonas sp. OK242
NCBI taxonomy Id: 1798195
Other names: C. sp. OK242
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.