STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDQ17906.1Uncharacterized conserved protein, UPF0335 family; Belongs to the UPF0335 family. (85 aa)    
Predicted Functional Partners:
SDQ17928.1
Hypothetical protein.
       0.773
SDQ17947.1
Protein of unknown function.
       0.773
SDQ17963.1
Hypothetical protein.
       0.773
SDQ17982.1
Hypothetical protein; Manually curated.
       0.773
SDQ18006.1
Hypothetical protein.
       0.773
SDQ18027.1
AAA domain-containing protein.
       0.773
SDR36050.1
Hypothetical protein.
  
   
 0.773
SDQ17888.1
Mu-like prophage protein gp16.
       0.763
SDR23425.1
DNA helicase/exodeoxyribonuclease V, subunit B.
  
     0.747
recO
DNA replication and repair protein RecO; Involved in DNA repair and RecF pathway recombination.
  
     0.722
Your Current Organism:
Pseudovibrio sp. TunPSC045I4
NCBI taxonomy Id: 1798213
Other names: P. sp. Tun.PSC04-5.I4, Pseudovibrio sp. Tun.PSC04-5.I4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.