STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDQ37144.1Replication initiation protein RepC. (427 aa)    
Predicted Functional Partners:
SDQ37090.1
Cellulose biosynthesis protein BcsQ.
 
     0.826
SDQ37119.1
Chromosome partitioning protein, ParB family; Belongs to the ParB family.
 
     0.803
SDQ18354.1
Chromosome partitioning protein.
 
     0.768
SDR47451.1
Chromosome partitioning protein.
 
     0.768
SDQ29126.1
Chromosome partitioning protein.
 
     0.745
SDQ31108.1
Chromosome partitioning protein, ParB family; Belongs to the ParB family.
 
     0.743
SDQ33972.1
Chromosome partitioning protein, ParB family.
 
     0.743
SDQ33947.1
Chromosome partitioning protein.
 
     0.741
SDR45624.1
Chromosome partitioning protein.
 
     0.741
SDQ18330.1
Chromosome partitioning protein, ParB family; Belongs to the ParB family.
 
     0.738
Your Current Organism:
Pseudovibrio sp. TunPSC045I4
NCBI taxonomy Id: 1798213
Other names: P. sp. Tun.PSC04-5.I4, Pseudovibrio sp. Tun.PSC04-5.I4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.