STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR47311.1Uncharacterized conserved protein. (140 aa)    
Predicted Functional Partners:
SDR47319.1
Hypothetical protein.
       0.773
SDR47325.1
Predicted kinase, aminoglycoside phosphotransferase (APT) family.
       0.711
SDQ19331.1
S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
    
 0.561
SDR47330.1
Hypothetical protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.498
SDR47335.1
Acyl dehydratase.
  
    0.498
SDR47343.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
       0.498
SDQ91304.1
Uncharacterized conserved protein.
 
   
 0.487
SDR47298.1
Amino acid ABC transporter substrate-binding protein, PAAT family; Belongs to the bacterial solute-binding protein 3 family.
    
  0.465
SDR47304.1
DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains.
       0.437
Your Current Organism:
Pseudovibrio sp. TunPSC045I4
NCBI taxonomy Id: 1798213
Other names: P. sp. Tun.PSC04-5.I4, Pseudovibrio sp. Tun.PSC04-5.I4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.