STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEH62586.1DNA gyrase subunit B. (667 aa)    
Predicted Functional Partners:
SEH62572.1
DNA gyrase subunit A.
 0.999
SEH96907.1
DNA gyrase subunit A.
 0.998
SEI11078.1
Molecular chaperone DnaK.
  
 
 0.961
SEH62617.1
DNA replication and repair protein RecF.
  
  
 0.939
SEH62649.1
DNA polymerase III, beta subunit.
  
 
 0.905
SEH57338.1
Uncharacterized protein YjbI, contains pentapeptide repeats.
    
 
 0.869
SEH99785.1
Uncharacterized protein YjbI, contains pentapeptide repeats.
    
 
 0.869
SEH89586.1
DNA topoisomerase-1.
   
 
 0.840
SEH94702.1
DNA polymerase I.
  
 0.833
SEH90169.1
RecA protein.
  
 
 0.826
Your Current Organism:
Leifsonia sp. CL154
NCBI taxonomy Id: 1798214
Other names: L. sp. CL154
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.