STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ69406.1prolyl-tRNA synthetase. (588 aa)    
Predicted Functional Partners:
SDJ67535.1
Isoleucyl-tRNA synthetase.
   
 0.993
SDJ54236.1
arginyl-tRNA synthetase.
 
 0.989
SDJ92378.1
methionyl-tRNA synthetase.
  
 0.984
SDJ61802.1
glutamyl-tRNA synthetase.
 
 0.981
SDK39154.1
aspartyl-tRNA synthetase.
  
 0.978
SDJ69850.1
leucyl-tRNA synthetase.
 
 0.974
SDK10383.1
lysyl-tRNA synthetase, class II.
  
 0.965
SDJ63061.1
KTSC domain-containing protein.
  
 0.950
SDJ49451.1
phenylalanyl-tRNA synthetase beta subunit.
 
 
 0.858
SDK31251.1
Flagellar motor switch protein FliN/FliY.
    
   0.813
Your Current Organism:
Leifsonia sp. 157MF
NCBI taxonomy Id: 1798222
Other names: L. sp. 157MF
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.