STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK04703.1ATP dependent helicase, Lhr family. (1588 aa)    
Predicted Functional Partners:
SDK04731.1
Endonuclease-8.
 
  
 0.973
SDK10093.1
DNA repair protein RadA/Sms.
   
    0.676
SDK39743.1
3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase.
  
    0.623
SDK04674.1
Phospholipase/carboxylesterase.
       0.607
SDJ86649.1
RecA protein.
  
 
 0.592
SDJ66847.1
Endonuclease-8.
  
  
 0.581
SDJ75808.1
Superfamily II DNA or RNA helicase.
  
 
   0.475
SDK04645.1
Protein of unknown function.
       0.464
SDJ53244.1
ATP-dependent DNA ligase.
 
    0.445
Your Current Organism:
Leifsonia sp. 157MF
NCBI taxonomy Id: 1798222
Other names: L. sp. 157MF
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.