STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK27294.1Putative glutamate/gamma-aminobutyrate antiporter. (537 aa)    
Predicted Functional Partners:
SDK27317.1
Glutamate decarboxylase.
 
 
  0.878
SDJ51552.1
Trehalose synthase.
    
  0.780
SDJ65164.1
Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase.
    
  0.780
SDJ68237.1
Alpha-glucosidase.
    
  0.780
SDJ75977.1
Maltose alpha-D-glucosyltransferase/ alpha-amylase.
    
  0.780
SDK29951.1
Sucrose phosphorylase.
    
  0.780
SDK44867.1
Oligo-1,6-glucosidase.
    
  0.780
SDK46152.1
Alpha-glucosidase.
    
  0.780
SDK51725.1
Maltose alpha-D-glucosyltransferase/ alpha-amylase.
    
  0.780
SDJ69381.1
RNB domain-containing protein.
    
  0.658
Your Current Organism:
Leifsonia sp. 157MF
NCBI taxonomy Id: 1798222
Other names: L. sp. 157MF
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.