STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDK35629.1Shikimate dehydrogenase. (271 aa)    
Predicted Functional Partners:
SDJ78975.1
Shikimate kinase.
 
 0.983
SDJ78944.1
3-dehydroquinate synthase.
 
 0.965
SDJ78888.1
3-dehydroquinate dehydratase.
  
 
 0.929
SDJ48084.1
3-phosphoshikimate 1-carboxyvinyltransferase.
 
 0.915
SDJ79028.1
Shikimate dehydrogenase.
  
  
0.910
SDJ79009.1
Chorismate synthase.
 
 
 0.883
SDK45654.1
Isochorismate synthase.
     
 0.853
SDJ69828.1
Anthranilate synthase component 1.
 
 
 0.725
SDJ78153.1
Anthranilate synthase, component I.
 
 
 0.715
SDK34445.1
Para-aminobenzoate synthetase component 2.
 
 0.662
Your Current Organism:
Leifsonia sp. 157MF
NCBI taxonomy Id: 1798222
Other names: L. sp. 157MF
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.