STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR66146.1Gliding motility-associated protein GldC. (111 aa)    
Predicted Functional Partners:
SDR66159.1
Gliding motility-associated lipoprotein GldB.
 
   
 0.871
SDR66132.1
DNA-binding transcriptional regulator, AcrR family.
       0.773
SDR66140.1
Protein of unknown function.
       0.773
SDR70596.1
Protein of unknown function.
  
     0.758
SDR69652.1
Hypothetical protein.
  
     0.753
SDR66167.1
NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source.
 
     0.702
SDS33360.1
Hypothetical protein.
  
     0.699
SDS64475.1
Hypothetical protein.
  
     0.640
SDS44012.1
Acyl-CoA reductase (LuxC).
  
     0.578
SDR66118.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
       0.576
Your Current Organism:
Formosa sp. Hel131208
NCBI taxonomy Id: 1798225
Other names: F. sp. Hel1_31_208, Formosa sp. Hel1_31_208
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.