Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDR73776.1 | SDR73813.1 | SAMN04515667_0500 | SAMN04515667_0501 | ElaA protein. | Cobalt-zinc-cadmium efflux system protein. | 0.817 |
SDR73776.1 | SDR73841.1 | SAMN04515667_0500 | SAMN04515667_0502 | ElaA protein. | Ribose 5-phosphate isomerase B. | 0.855 |
SDR73776.1 | ftsH | SAMN04515667_0500 | SAMN04515667_1370 | ElaA protein. | Cell division protease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | 0.522 |
SDR73776.1 | mltG | SAMN04515667_0500 | SAMN04515667_2430 | ElaA protein. | UPF0755 protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. | 0.445 |
SDR73813.1 | SDR73776.1 | SAMN04515667_0501 | SAMN04515667_0500 | Cobalt-zinc-cadmium efflux system protein. | ElaA protein. | 0.817 |
SDR73813.1 | SDR73841.1 | SAMN04515667_0501 | SAMN04515667_0502 | Cobalt-zinc-cadmium efflux system protein. | Ribose 5-phosphate isomerase B. | 0.803 |
SDR73841.1 | SDR73776.1 | SAMN04515667_0502 | SAMN04515667_0500 | Ribose 5-phosphate isomerase B. | ElaA protein. | 0.855 |
SDR73841.1 | SDR73813.1 | SAMN04515667_0502 | SAMN04515667_0501 | Ribose 5-phosphate isomerase B. | Cobalt-zinc-cadmium efflux system protein. | 0.803 |
ftsH | SDR73776.1 | SAMN04515667_1370 | SAMN04515667_0500 | Cell division protease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | ElaA protein. | 0.522 |
mltG | SDR73776.1 | SAMN04515667_2430 | SAMN04515667_0500 | UPF0755 protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. | ElaA protein. | 0.445 |