STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR81918.1comF family protein. (226 aa)    
Predicted Functional Partners:
SDR76649.1
DNA processing protein.
 
 
 0.913
SDR89213.1
Competence protein ComEC.
 
  
 0.867
SDS50263.1
Magnesium chelatase family protein.
 
  
 0.819
SDR81966.1
Ig-like domain-containing protein.
       0.704
SDS05702.1
DNA repair protein RadC; Belongs to the UPF0758 family.
  
    0.692
SDR66355.1
Prephenate dehydrogenase.
   
  
 0.684
SDS69519.1
Lipopolysaccharide transport system ATP-binding protein.
   
    0.650
purL
Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate.
    
  0.646
SDR79208.1
Putative endonuclease; Belongs to the UPF0102 family.
 
    0.609
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
  
 
  0.593
Your Current Organism:
Formosa sp. Hel131208
NCBI taxonomy Id: 1798225
Other names: F. sp. Hel1_31_208, Formosa sp. Hel1_31_208
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.