STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS19940.1PAP2 superfamily protein. (286 aa)    
Predicted Functional Partners:
SDS47821.1
O-succinylbenzoic acid--CoA ligase.
    
 0.713
SDS19861.1
Diacylglycerol kinase (ATP); Manually curated.
    
 0.693
SDS52143.1
Hypothetical protein.
  
     0.674
SDR67516.1
Hypothetical protein; Belongs to the cytochrome P450 family.
    
  0.664
SDR78833.1
Hypothetical protein.
  
     0.644
SDS27682.1
Hypothetical protein.
  
    0.643
rplF
LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
    
  0.614
SDS53893.1
RNA polymerase Rpb6.
    
   0.599
SDR67030.1
Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
  
 
 0.554
SDS27050.1
Hypothetical protein.
  
     0.543
Your Current Organism:
Formosa sp. Hel131208
NCBI taxonomy Id: 1798225
Other names: F. sp. Hel1_31_208, Formosa sp. Hel1_31_208
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.