Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDS31230.1 | SDS31278.1 | SAMN04515667_1889 | SAMN04515667_1890 | Hypothetical protein. | Hypothetical protein. | 0.590 |
SDS31230.1 | SDS31315.1 | SAMN04515667_1889 | SAMN04515667_1891 | Hypothetical protein. | Penicillin amidase. | 0.590 |
SDS31230.1 | SDS31346.1 | SAMN04515667_1889 | SAMN04515667_1892 | Hypothetical protein. | Protein of unknown function. | 0.484 |
SDS31230.1 | SDS31393.1 | SAMN04515667_1889 | SAMN04515667_1893 | Hypothetical protein. | Hypothetical protein. | 0.432 |
SDS31230.1 | recF | SAMN04515667_1889 | SAMN04515667_1894 | Hypothetical protein. | DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family. | 0.432 |
SDS31278.1 | SDS31230.1 | SAMN04515667_1890 | SAMN04515667_1889 | Hypothetical protein. | Hypothetical protein. | 0.590 |
SDS31278.1 | SDS31315.1 | SAMN04515667_1890 | SAMN04515667_1891 | Hypothetical protein. | Penicillin amidase. | 0.942 |
SDS31278.1 | SDS31346.1 | SAMN04515667_1890 | SAMN04515667_1892 | Hypothetical protein. | Protein of unknown function. | 0.625 |
SDS31278.1 | SDS31393.1 | SAMN04515667_1890 | SAMN04515667_1893 | Hypothetical protein. | Hypothetical protein. | 0.655 |
SDS31278.1 | recF | SAMN04515667_1890 | SAMN04515667_1894 | Hypothetical protein. | DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family. | 0.552 |
SDS31315.1 | SDS31230.1 | SAMN04515667_1891 | SAMN04515667_1889 | Penicillin amidase. | Hypothetical protein. | 0.590 |
SDS31315.1 | SDS31278.1 | SAMN04515667_1891 | SAMN04515667_1890 | Penicillin amidase. | Hypothetical protein. | 0.942 |
SDS31315.1 | SDS31346.1 | SAMN04515667_1891 | SAMN04515667_1892 | Penicillin amidase. | Protein of unknown function. | 0.625 |
SDS31315.1 | SDS31393.1 | SAMN04515667_1891 | SAMN04515667_1893 | Penicillin amidase. | Hypothetical protein. | 0.552 |
SDS31315.1 | recF | SAMN04515667_1891 | SAMN04515667_1894 | Penicillin amidase. | DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family. | 0.552 |
SDS31346.1 | SDS31230.1 | SAMN04515667_1892 | SAMN04515667_1889 | Protein of unknown function. | Hypothetical protein. | 0.484 |
SDS31346.1 | SDS31278.1 | SAMN04515667_1892 | SAMN04515667_1890 | Protein of unknown function. | Hypothetical protein. | 0.625 |
SDS31346.1 | SDS31315.1 | SAMN04515667_1892 | SAMN04515667_1891 | Protein of unknown function. | Penicillin amidase. | 0.625 |
SDS31346.1 | SDS31393.1 | SAMN04515667_1892 | SAMN04515667_1893 | Protein of unknown function. | Hypothetical protein. | 0.763 |
SDS31346.1 | recF | SAMN04515667_1892 | SAMN04515667_1894 | Protein of unknown function. | DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family. | 0.799 |
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