STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS59474.1Glycosyltransferase family 52. (333 aa)    
Predicted Functional Partners:
SDS37839.1
UDP-2-acetamido-2,6-beta-L-arabino-hexul-4-ose reductase.
  
    0.661
SDS59383.1
Lipopolysaccharide kinase (Kdo/WaaP) family protein.
  
    0.571
SDS59438.1
Hypothetical protein.
  
    0.571
SDS59539.1
HDIG domain-containing protein; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
       0.566
ctaA
Cytochrome c oxidase assembly protein subunit 15; Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group; Belongs to the COX15/CtaA family. Type 2 subfamily.
       0.566
SDS59575.1
Acetyltransferase (GNAT) domain-containing protein.
       0.556
SDR75525.1
UDPglucose 6-dehydrogenase.
  
    0.534
SDS69559.1
Lipopolysaccharide transport system permease protein.
  
    0.515
SDS59673.1
pRiA4b ORF-3-like protein.
       0.498
SDS59714.1
HupE / UreJ protein.
       0.483
Your Current Organism:
Formosa sp. Hel131208
NCBI taxonomy Id: 1798225
Other names: F. sp. Hel1_31_208, Formosa sp. Hel1_31_208
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.