STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD88364.1AAA domain-containing protein. (1223 aa)    
Predicted Functional Partners:
SFE65597.1
ATP-dependent DNA helicase, Rep family.
  
 
 0.928
SFF58524.1
Hypothetical protein.
  
     0.718
SFF45736.1
Exodeoxyribonuclease V alpha subunit.
  
  
  0.682
SFD88410.1
Site-specific recombinase XerD; Belongs to the 'phage' integrase family.
 
     0.669
SFF87710.1
Protein of unknown function.
  
     0.642
SFF62744.1
Protein of unknown function.
  
     0.629
SFF88862.1
Predicted membrane protein.
  
     0.624
SFE51251.1
Protein of unknown function.
  
    0.614
SFE85911.1
RIO1 family protein.
  
     0.595
SFF79893.1
Protein of unknown function (DU1801).
  
     0.584
Your Current Organism:
Blastococcus sp. DSM 46838
NCBI taxonomy Id: 1798228
Other names: B. sp. DSM 46838
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