STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGS96875.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (768 aa)    
Predicted Functional Partners:
OGS95341.1
Cell division protein FtsK; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.759
OGS96391.1
Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.750
OGS97423.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
  0.625
OGS95637.1
Peptidase S41; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S41A family.
   
  0.608
OGS96556.1
Tail-specific protease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S41A family.
   
  0.608
OGS95410.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
   0.518
aroK
Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
       0.513
OGS96055.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
  0.459
OGS94425.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
  0.459
OGS96435.1
Acyl-phosphate glycerol 3-phosphate acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.443
Your Current Organism:
Gallionellales bacterium RIFCSPLOWO202FULL5747
NCBI taxonomy Id: 1798254
Other names: G. bacterium RIFCSPLOWO2_02_FULL_57_47, Gallionellales bacterium RIFCSPLOWO2_02_FULL_57_47
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.