STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGT26401.1DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (109 aa)    
Predicted Functional Partners:
OGT27029.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.738
OGT26756.1
Replicative DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.715
OGT26197.1
DNA primase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.707
OGT25216.1
Integration host factor subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.689
dnaA
Chromosomal replication initiation protein DnaA; Binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.604
OGT26317.1
DNA polymerase I; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.579
OGT25384.1
DNA topoisomerase I; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.547
OGT25768.1
methionine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.546
OGT25757.1
DnaA regulatory inactivator Hda; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.528
OGT25759.1
Integration host factor subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.520
Your Current Organism:
Gammaproteobacteria bacterium RIFCSPHIGHO202FULL4243
NCBI taxonomy Id: 1798272
Other names: G. bacterium RIFCSPHIGHO2_02_FULL_42_43, Gammaproteobacteria bacterium RIFCSPHIGHO2_02_FULL_42_43
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.