STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGT26104.116S rRNA (cytosine(1402)-N(4))-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (309 aa)    
Predicted Functional Partners:
OGT26105.1
Cell division/cell wall cluster transcriptional repressor MraZ; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.991
OGT26103.1
Cell division protein FtsL; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.942
OGT26102.1
Cell division protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.894
OGT26386.1
30S ribosomal protein S9; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.851
OGT26753.1
30S ribosomal protein S6; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.836
OGT25243.1
30S ribosomal protein S16; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.831
OGT26095.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.747
OGT25681.1
30S ribosomal protein S12; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.726
OGT26393.1
30S ribosomal protein S15; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.724
OGT25680.1
30S ribosomal protein S7; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.717
Your Current Organism:
Gammaproteobacteria bacterium RIFCSPHIGHO202FULL4243
NCBI taxonomy Id: 1798272
Other names: G. bacterium RIFCSPHIGHO2_02_FULL_42_43, Gammaproteobacteria bacterium RIFCSPHIGHO2_02_FULL_42_43
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.