STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGT41350.1acetyl-CoA acetyltransferase; Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family. (429 aa)    
Predicted Functional Partners:
OGT41349.1
Crotonase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family.
 0.999
OGT44423.1
hydroxymethylglutaryl-CoA synthase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 0.973
OGT41358.1
acyl-CoA dehydrogenase; Functions in fatty acid oxidation; converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.935
OGT42722.1
enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.935
OGT42502.1
enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.908
OGT41079.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.882
OGT42503.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.879
A3F42_00240
Hypothetical protein; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.851
OGT42749.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.832
OGT42090.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the citrate synthase family.
  
 0.812
Your Current Organism:
Gammaproteobacteria bacterium RIFCSPHIGHO212FULL3734
NCBI taxonomy Id: 1798277
Other names: G. bacterium RIFCSPHIGHO2_12_FULL_37_34, Gammaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_37_34
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