STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGT50828.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the glycosyl hydrolase 30 family. (560 aa)    
Predicted Functional Partners:
OGT50718.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
 0.808
fabV
trans-2-enoyl-CoA reductase; Involved in the final reduction of the elongation cycle of fatty acid synthesis (FAS II). Catalyzes the reduction of a carbon- carbon double bond in an enoyl moiety that is covalently linked to an acyl carrier protein (ACP); Belongs to the TER reductase family.
 
     0.605
OGT53839.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.591
OGT53439.1
beta-N-acetylhexosaminidase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
 0.578
OGT50829.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.480
Your Current Organism:
Gammaproteobacteria bacterium RIFCSPHIGHO212FULL4213
NCBI taxonomy Id: 1798286
Other names: G. bacterium RIFCSPHIGHO2_12_FULL_42_13, Gammaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_42_13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.