STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGT89078.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (1027 aa)    
Predicted Functional Partners:
OGT89857.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.999
OGT89922.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
0.999
OGT88339.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
0.999
OGT88358.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 0.999
A2514_02895
Hypothetical protein; Metagenomic; derived from metagenome: subsurface metagenome.
 
0.999
OGT88645.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
0.999
OGT88652.1
Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.999
OGT90406.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
0.999
OGT90037.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
0.999
OGT90703.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
0.999
Your Current Organism:
Gammaproteobacteria bacterium RIFOXYD12FULL6137
NCBI taxonomy Id: 1798308
Other names: G. bacterium RIFOXYD12_FULL_61_37, Gammaproteobacteria bacterium RIFOXYD12_FULL_61_37
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.