OGU14685.1 protein (Geobacteraceae bacterium GWC25311)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

OGU14685.1

Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (235 aa)

Predicted Functional Partners:

OGU14356.1

0.897

OGU17303.1

0.817

OGU13201.1

0.817

OGU13111.1

0.817

OGU13113.1

0.817

OGU14686.1

0.817

OGU14687.1

0.817

OGU14011.1

0.817

OGU15286.1

0.817

OGU13555.1

0.817

Your Current Organism:

Geobacteraceae bacterium GWC25311

NCBI taxonomy Id: 1798316
Other names: G. bacterium GWC2_53_11, Geobacteraceae bacterium GWC2_53_11

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
OGU13111.1	OGU13113.1	A2076_07490	A2076_07500	Derived by automated computational analysis using gene prediction method: Protein Homology.	Derived by automated computational analysis using gene prediction method: Protein Homology.	0.784
OGU13111.1	OGU13201.1	A2076_07490	A2076_07335	Derived by automated computational analysis using gene prediction method: Protein Homology.	Derived by automated computational analysis using gene prediction method: Protein Homology.	0.706
OGU13111.1	OGU13555.1	A2076_07490	A2076_16660	Derived by automated computational analysis using gene prediction method: Protein Homology.	Derived by automated computational analysis using gene prediction method: Protein Homology.	0.449
OGU13111.1	OGU14356.1	A2076_07490	A2076_17710	Derived by automated computational analysis using gene prediction method: Protein Homology.	Derived by automated computational analysis using gene prediction method: Protein Homology.	0.817
OGU13111.1	OGU14685.1	A2076_07490	A2076_08230	Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.817
OGU13113.1	OGU13111.1	A2076_07500	A2076_07490	Derived by automated computational analysis using gene prediction method: Protein Homology.	Derived by automated computational analysis using gene prediction method: Protein Homology.	0.784
OGU13113.1	OGU14356.1	A2076_07500	A2076_17710	Derived by automated computational analysis using gene prediction method: Protein Homology.	Derived by automated computational analysis using gene prediction method: Protein Homology.	0.817
OGU13113.1	OGU14685.1	A2076_07500	A2076_08230	Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.817
OGU13113.1	OGU14686.1	A2076_07500	A2076_08240	Derived by automated computational analysis using gene prediction method: Protein Homology.	Derived by automated computational analysis using gene prediction method: Protein Homology.	0.674
OGU13113.1	OGU14687.1	A2076_07500	A2076_08245	Derived by automated computational analysis using gene prediction method: Protein Homology.	Derived by automated computational analysis using gene prediction method: Protein Homology.	0.594
OGU13201.1	OGU13111.1	A2076_07335	A2076_07490	Derived by automated computational analysis using gene prediction method: Protein Homology.	Derived by automated computational analysis using gene prediction method: Protein Homology.	0.706
OGU13201.1	OGU14356.1	A2076_07335	A2076_17710	Derived by automated computational analysis using gene prediction method: Protein Homology.	Derived by automated computational analysis using gene prediction method: Protein Homology.	0.820
OGU13201.1	OGU14685.1	A2076_07335	A2076_08230	Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.817
OGU13555.1	OGU13111.1	A2076_16660	A2076_07490	Derived by automated computational analysis using gene prediction method: Protein Homology.	Derived by automated computational analysis using gene prediction method: Protein Homology.	0.449
OGU13555.1	OGU14356.1	A2076_16660	A2076_17710	Derived by automated computational analysis using gene prediction method: Protein Homology.	Derived by automated computational analysis using gene prediction method: Protein Homology.	0.817
OGU13555.1	OGU14685.1	A2076_16660	A2076_08230	Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.817
OGU14011.1	OGU14356.1	A2076_09685	A2076_17710	Derived by automated computational analysis using gene prediction method: Protein Homology.	Derived by automated computational analysis using gene prediction method: Protein Homology.	0.817
OGU14011.1	OGU14685.1	A2076_09685	A2076_08230	Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.817
OGU14011.1	OGU14686.1	A2076_09685	A2076_08240	Derived by automated computational analysis using gene prediction method: Protein Homology.	Derived by automated computational analysis using gene prediction method: Protein Homology.	0.502
OGU14011.1	OGU14687.1	A2076_09685	A2076_08245	Derived by automated computational analysis using gene prediction method: Protein Homology.	Derived by automated computational analysis using gene prediction method: Protein Homology.	0.579