STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGU17051.1Efflux transporter periplasmic adaptor subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (373 aa)    
Predicted Functional Partners:
A2076_11375
Hypothetical protein; Frameshifted; too many ambiguous residues; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 0.997
OGU15292.1
Multidrug efflux RND transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.993
OGU15214.1
Acriflavin resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 0.981
OGU15296.1
Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.980
OGU14653.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.977
OGU14196.1
RND transporter; CyaE is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin). Belongs to the outer membrane factor (OMF) (TC 1.B.17) family.
 
 0.967
macB
Macrolide ABC transporter permease/ATP-binding protein MacB; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
 
 0.967
OGU15562.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 0.966
OGU15965.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.951
OGU13069.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.946
Your Current Organism:
Geobacteraceae bacterium GWC25311
NCBI taxonomy Id: 1798316
Other names: G. bacterium GWC2_53_11, Geobacteraceae bacterium GWC2_53_11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.