A2076_15225 protein (Geobacteraceae bacterium GWC25311)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

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gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

A2076_15225

Hypothetical protein; Frameshifted; too many ambiguous residues; Derived by automated computational analysis using gene prediction method: Protein Homology. (543 aa)

Predicted Functional Partners:

OGU13079.1

0.850

OGU16140.1

0.827

A2076_00005

0.805

OGU17265.1

0.805

OGU14199.1

0.805

OGU16349.1

0.805

OGU15433.1

0.805

OGU15942.1

0.805

A2076_07970

0.805

OGU14682.1

0.805

Your Current Organism:

Geobacteraceae bacterium GWC25311

NCBI taxonomy Id: 1798316
Other names: G. bacterium GWC2_53_11, Geobacteraceae bacterium GWC2_53_11

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A2076_00005	A2076_15225	A2076_00005	A2076_15225	NADH:flavin oxidoreductase; Metagenomic; derived from metagenome: subsurface metagenome.	Hypothetical protein; Frameshifted; too many ambiguous residues; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.805
A2076_00005	OGU13079.1	A2076_00005	A2076_07305	NADH:flavin oxidoreductase; Metagenomic; derived from metagenome: subsurface metagenome.	Derived by automated computational analysis using gene prediction method: Protein Homology.	0.449
A2076_07970	A2076_15225	A2076_07970	A2076_15225	Hypothetical protein; Too many ambiguous residues; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Frameshifted; too many ambiguous residues; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.805
A2076_07970	OGU13079.1	A2076_07970	A2076_07305	Hypothetical protein; Too many ambiguous residues; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Derived by automated computational analysis using gene prediction method: Protein Homology.	0.449
A2076_15225	A2076_00005	A2076_15225	A2076_00005	Hypothetical protein; Frameshifted; too many ambiguous residues; Derived by automated computational analysis using gene prediction method: Protein Homology.	NADH:flavin oxidoreductase; Metagenomic; derived from metagenome: subsurface metagenome.	0.805
A2076_15225	A2076_07970	A2076_15225	A2076_07970	Hypothetical protein; Frameshifted; too many ambiguous residues; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Too many ambiguous residues; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.805
A2076_15225	OGU13079.1	A2076_15225	A2076_07305	Hypothetical protein; Frameshifted; too many ambiguous residues; Derived by automated computational analysis using gene prediction method: Protein Homology.	Derived by automated computational analysis using gene prediction method: Protein Homology.	0.850
A2076_15225	OGU14199.1	A2076_15225	A2076_01895	Hypothetical protein; Frameshifted; too many ambiguous residues; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.805
A2076_15225	OGU14682.1	A2076_15225	A2076_08215	Hypothetical protein; Frameshifted; too many ambiguous residues; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.805
A2076_15225	OGU15433.1	A2076_15225	A2076_04350	Hypothetical protein; Frameshifted; too many ambiguous residues; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.805
A2076_15225	OGU15942.1	A2076_15225	A2076_04665	Hypothetical protein; Frameshifted; too many ambiguous residues; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.805
A2076_15225	OGU16140.1	A2076_15225	A2076_05735	Hypothetical protein; Frameshifted; too many ambiguous residues; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.827
A2076_15225	OGU16349.1	A2076_15225	A2076_02910	Hypothetical protein; Frameshifted; too many ambiguous residues; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.805
A2076_15225	OGU17265.1	A2076_15225	A2076_00750	Hypothetical protein; Frameshifted; too many ambiguous residues; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.805
OGU13079.1	A2076_00005	A2076_07305	A2076_00005	Derived by automated computational analysis using gene prediction method: Protein Homology.	NADH:flavin oxidoreductase; Metagenomic; derived from metagenome: subsurface metagenome.	0.449
OGU13079.1	A2076_07970	A2076_07305	A2076_07970	Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Too many ambiguous residues; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.449
OGU13079.1	A2076_15225	A2076_07305	A2076_15225	Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Frameshifted; too many ambiguous residues; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.850
OGU13079.1	OGU14199.1	A2076_07305	A2076_01895	Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.449
OGU13079.1	OGU14682.1	A2076_07305	A2076_08215	Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.449
OGU13079.1	OGU15433.1	A2076_07305	A2076_04350	Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.449

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