STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGU14763.1Fatty acid hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (266 aa)    
Predicted Functional Partners:
OGU15435.1
Squalene--hopene cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.958
OGU16723.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.854
OGU14056.1
Fatty acid desaturase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.846
A2076_00595
Glycosyl transferase family 2; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.823
OGU13543.1
Methyltransferase type 11; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.823
OGU14756.1
Methyltransferase type 11; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.823
OGU13966.1
Epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.820
OGU14534.1
NAD(P)-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.788
OGU16623.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.788
OGU15436.1
NAD-dependent dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.788
Your Current Organism:
Geobacteraceae bacterium GWC25311
NCBI taxonomy Id: 1798316
Other names: G. bacterium GWC2_53_11, Geobacteraceae bacterium GWC2_53_11
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