STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGU27990.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (298 aa)    
Predicted Functional Partners:
OGU27989.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.776
OGU27988.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
OGU27802.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.594
OGU27803.1
Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.519
OGU27880.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.467
OGU25905.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.455
OGU27879.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.449
OGU27805.1
Xylose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.440
OGU27812.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.433
Your Current Organism:
Ignavibacteria bacterium GWA25416
NCBI taxonomy Id: 1798420
Other names: I. bacterium GWA2_54_16, Ignavibacteria bacterium GWA2_54_16
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.