STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGU26960.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (188 aa)    
Predicted Functional Partners:
OGU26861.1
AmmeMemoRadiSam system protein B; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    0.996
OGU26606.1
AmmeMemoRadiSam system radical SAM enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.943
A2X66_04705
Hypothetical protein; Metagenomic; derived from metagenome: subsurface metagenome; Belongs to the MEMO1 family.
 
   
0.448
OGU26860.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the PHP hydrolase family. HisK subfamily.
  
    0.447
Your Current Organism:
Ignavibacteria bacterium GWA25416
NCBI taxonomy Id: 1798420
Other names: I. bacterium GWA2_54_16, Ignavibacteria bacterium GWA2_54_16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.