STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGU32662.150S ribosomal protein L6; Derived by automated computational analysis using gene prediction method: Protein Homology. (182 aa)    
Predicted Functional Partners:
OGU32640.1
50S ribosomal protein L11; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.999
OGU32641.1
50S ribosomal protein L1; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.999
OGU32642.1
50S ribosomal protein L10; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.999
OGU32643.1
50S ribosomal protein L7/L12; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.999
OGU32676.1
DNA-directed RNA polymerase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.999
OGU32645.1
30S ribosomal protein S12; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
OGU32646.1
30S ribosomal protein S7; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
OGU32647.1
Translation elongation factor Tu; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.999
OGU32648.1
30S ribosomal protein S10; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
OGU32649.1
50S ribosomal protein L3; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
Your Current Organism:
Ignavibacteria bacterium GWA25511
NCBI taxonomy Id: 1798421
Other names: I. bacterium GWA2_55_11, Ignavibacteria bacterium GWA2_55_11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.