STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGU31303.1formamidopyrimidine-DNA glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (293 aa)    
Predicted Functional Partners:
OGU28978.1
DNA polymerase I; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.983
OGU30550.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 
 0.852
OGU32790.1
dephospho-CoA kinase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  
 0.813
OGU31304.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.762
OGU28716.1
Endonuclease III; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.684
OGU32904.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.656
OGU31305.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.464
OGU31306.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.464
OGU30615.1
Excinuclease ABC subunit C; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 
 0.439
OGU31010.1
Glutamate synthase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.414
Your Current Organism:
Ignavibacteria bacterium GWA25511
NCBI taxonomy Id: 1798421
Other names: I. bacterium GWA2_55_11, Ignavibacteria bacterium GWA2_55_11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.