STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGV15811.1Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (438 aa)    
Predicted Functional Partners:
OGV15828.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.961
OGV15812.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.940
OGV15810.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.774
OGV15809.1
Hyaluronate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.763
OGV15671.1
Epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.701
OGV13298.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.701
OGV15463.1
Acetylgalactosaminidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.675
OGV15588.1
Sulfatase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
    0.675
OGV16094.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.674
OGV15868.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.673
Your Current Organism:
Ignavibacteria bacterium RIFOXYC2FULL3825
NCBI taxonomy Id: 1798453
Other names: I. bacterium RIFOXYC2_FULL_38_25, Ignavibacteria bacterium RIFOXYC2_FULL_38_25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.