STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGV15815.1Protoporphyrinogen oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (468 aa)    
Predicted Functional Partners:
OGV15816.1
Ferrochelatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.996
A2440_02110
GxxExxY protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.983
OGV15817.1
Oxygen-independent coproporphyrinogen III oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.955
OGV13828.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.917
OGV15814.1
Delta-aminolevulinic acid dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.879
OGV15726.1
Uroporphyrinogen decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.853
OGV13209.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.853
OGV13210.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.853
OGV15813.1
Glutamate-1-semialdehyde-2,1-aminomutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.837
OGV16228.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
    0.818
Your Current Organism:
Ignavibacteria bacterium RIFOXYC2FULL3825
NCBI taxonomy Id: 1798453
Other names: I. bacterium RIFOXYC2_FULL_38_25, Ignavibacteria bacterium RIFOXYC2_FULL_38_25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.