STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGV15376.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (374 aa)    
Predicted Functional Partners:
OGV16896.1
NADH dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.982
OGV12317.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.982
OGV13215.1
Dihydropyrimidine dehydrogenase subunit B; NADH-dependent; catalyzes the conversion of pyrimidines to 5,6-dihydro compounds in pyrimidine degradation; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.971
OGV16913.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.968
OGV15745.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.863
OGV13861.1
NADH:ubiquinone oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.841
OGV15595.1
NADH-quinone oxidoreductase subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.807
OGV16088.1
NADPH-quinone oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.807
OGV12548.1
Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.807
OGV15377.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.776
Your Current Organism:
Ignavibacteria bacterium RIFOXYC2FULL3825
NCBI taxonomy Id: 1798453
Other names: I. bacterium RIFOXYC2_FULL_38_25, Ignavibacteria bacterium RIFOXYC2_FULL_38_25
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.